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Python | REOF分析

  • 2026-09-07 19:33:15
Python | REOF分析

简介

EOF(经验正交函数)和REOF(旋转经验正交函数)是气象与海洋数据分析中常用的时空降维技术。EOF侧重于提取最大的方差贡献,其特征向量呈全局分布,而REOF是对EOF的载荷向量进行旋转(常用Varimax法),使区域性特征更清晰、物理意义更明确,并解决EOF的区域重叠问题。 本文介绍如何使用Python实现REOF分析,并以CMAP降水数据为例尝试复现一篇文章的图1a(https://doi.org/10.1007/s00376-022-2079-1)。注意!!代码主要使用了AI的计算过程,仅供参考!

代码

import numpy as npimport xarray as xrimport matplotlib.pyplot as pltimport cartopy.crs as ccrsimport cartopy.feature as cfeature# from cartopy.mpl.ticker import LongitudeFormatter, LatitudeFormatterfrom sklearn.preprocessing import StandardScalerimport warningsimport osimport cmapsfrom cartopy.io.shapereader import Reader as shpreaderwarnings.filterwarnings('ignore')class REOF:"""    REOF (旋转经验正交函数)    基于EOF + VARIMAX旋转    """    def __init__(self, n_components=None, rotate=True, max_iter=1000, tol=1e-6):        self.n_components = n_components        self.rotate = rotate        self.max_iter = max_iter        self.tol = tol    def fit(self, data):        self.original_data = data.copy()        self.original_shape = data.shape# 标准化        self.scaler = StandardScaler()        data_std = self.scaler.fit_transform(data.T).T# PCA        from sklearn.decomposition import PCA        self.pca = PCA(n_components=self.n_components)        scores = self.pca.fit_transform(data_std)        self.eofs = self.pca.components_.T        self.explained_variance = self.pca.explained_variance_        self.explained_variance_ratio = self.pca.explained_variance_ratio_if self.rotate and self.n_components and self.n_components > 1:            self._varimax_rotation(scores)else:            self.rotated_eofs = self.eofs            self.rotated_pcs = scores            self.rotation_matrix = Nonereturn self    def _varimax_rotation(self, scores):        loadings = self.eofs * np.sqrt(self.explained_variance)        n_spatial, n_modes = loadings.shape        h2 = np.sum(loadings ** 2, axis=1, keepdims=True)        h2_inv_sqrt = 1.0 / np.sqrt(h2 + 1e-10)        loadings_norm = loadings * h2_inv_sqrt        rotation_matrix = np.eye(n_modes)for iteration in range(self.max_iter):            rotated_loadings_norm = loadings_norm @ rotation_matrix            u = rotated_loadings_norm ** 3 - (1 / n_modes) * rotated_loadings_norm * np.sum(                rotated_loadings_norm ** 2, axis=1, keepdims=True)            B = loadings_norm.T @ u            U, s, Vt = np.linalg.svd(B)            new_rotation = U @ Vtif np.sum(np.abs(new_rotation - rotation_matrix)) < self.tol:break            rotation_matrix = new_rotation        self.rotation_matrix = rotation_matrix        rotated_loadings = loadings @ rotation_matrix        self.rotated_eofs = rotated_loadings / np.sqrt(self.explained_variance)        self.rotated_pcs = scores @ rotation_matrix.T        total_variance = np.sum(self.explained_variance)        rotated_variance = np.sum(rotated_loadings ** 2, axis=0)        self.rotated_explained_variance = rotated_variance        self.rotated_explained_variance_ratio = rotated_variance / total_variance    def get_eofs(self, rotated=True):return self.rotated_eofs if rotated else self.eofs    def get_pcs(self, rotated=True):if rotated:return self.rotated_pcselse:return self.pca.transform(self.scaler.transform(self.original_data.T).T)def read_cmap_data(file_path, start_year=1981, end_year=2020):"""    读取CMAP降水数据,提取中国东部区域,计算6-7月平均    """    ds = xr.open_dataset(file_path)# 查找降水变量if'precip'in ds.variables:        precip = ds['precip']elif'pre'in ds.variables:        precip = ds['pre']else:for var in ds.variables:if'precip'in var.lower() or 'pre'in var.lower():                precip = ds[var]break# 选择中国东部区域    china_east_lat = slice( 52, 18)    china_east_lon = slice(95, 135)    precip_east = precip.sel(lat=china_east_lat, lon=china_east_lon)# 选择6-7月数据    summer_data = precip_east.sel(time=precip_east.time.dt.month.isin([6, 7]))# 计算6-7月平均    summer_mean = summer_data.groupby('time.year').mean('time')# 选择指定年份范围    summer_mean = summer_mean.sel(year=slice(start_year, end_year))return summer_meandef prepare_data_for_reof(da):"""    准备数据用于REOF分析    """# 转换为 (时间, 空间点) 的二维数组    ntime, nlat, nlon = da.shape    data_flat = da.values.reshape(ntime, -1)# 去除含有NaN的格点    mask = ~np.isnan(data_flat).any(axis=0)    data_clean = data_flat[:, mask]# 保存原始网格信息用于绘图    lon2d, lat2d = np.meshgrid(da.lon.values, da.lat.values)    lon_flat = lon2d.flatten()[mask]    lat_flat = lat2d.flatten()[mask]# 进行标准化    scaler = StandardScaler()    data_std = scaler.fit_transform(data_clean.T).Treturn data_std, lon_flat, lat_flat, da.lat.values, da.lon.values, maskdef plot_reof_mode1(reofs, var_ratio, lat, lon, mask, mode=0,):"""    绘制REOF第一模态    """# 创建完整的网格(包括无效格点)    nlat, nlon = len(lat), len(lon)    full_grid = np.full((nlat, nlon), np.nan)    full_grid.flat[mask] = reofs[:, mode]    fig = plt.figure(figsize=(12, 10))    ax = fig.add_subplot(1, 1, 1, projection=ccrs.PlateCarree())# 绘制REOF模态    im = ax.pcolormesh(lon, lat, full_grid,                       cmap=cmaps.precip_diff_12lev,                       transform=ccrs.PlateCarree(),                       shading='auto',                       vmin=-0.2, vmax=0.2)# 添加海岸线    ax.add_feature(cfeature.COASTLINE, linewidth=0.8)# 添加长江流域框    yrb_lat_range = (27, 31)    yrb_lon_range = (107, 120)# 绘制长江流域框    ax.plot([yrb_lon_range[0], yrb_lon_range[1], yrb_lon_range[1], yrb_lon_range[0], yrb_lon_range[0]],            [yrb_lat_range[0], yrb_lat_range[0], yrb_lat_range[1], yrb_lat_range[1], yrb_lat_range[0]],            color='black', linewidth=3.5, transform=ccrs.PlateCarree())    shp_path = r'cnmap.shp'    ct = shpreader(shp_path).geometries()    ax.add_geometries(ct, ccrs.PlateCarree(), facecolor='none', edgecolor='grey', linewidth=2, zorder=6)    shp_path2 = r'river.shp'    ct2 = shpreader(shp_path2).geometries()    ax.add_geometries(ct2, ccrs.PlateCarree(), facecolor='none', edgecolor='b', linewidth=4, zorder=7)# 设置地图范围    ax.set_extent([100, 125, 20, 50])# 添加经纬度网格线    gl = ax.gridlines(draw_labels=True, linewidth=0.5, color='gray', alpha=0.5, linestyle='--')    gl.top_labels = False    gl.right_labels = False# 添加colorbar    cbar = plt.colorbar(im, ax=ax, orientation='vertical', pad=0.05, aspect=40, shrink=0.8)# 添加标题    ax.set_title(f'REOF1 {var_ratio[0]:.1f}% ',fontsize=20)    plt.tight_layout()    plt.savefig('reof.png', dpi=600, bbox_inches='tight')    plt.show()return figdef main():"""    主函数    """# 设置保存路径    save_dir = "D:\reof"# 读取CMAP数据    data_path = "precip.mon.mean.nc"    precip_da = read_cmap_data(data_path, start_year=1981, end_year=2020)    data_clean, lon_flat, lat_flat, lat, lon, mask = prepare_data_for_reof(precip_da)# 3. 执行REOF分析(旋转前10个模态)    n_modes_to_rotate = 10    reof_analyzer = REOF(n_components=n_modes_to_rotate, rotate=True)    reof_analyzer.fit(data_clean)    reofs = reof_analyzer.get_eofs(rotated=True)    rpcs = reof_analyzer.get_pcs(rotated=True)    reof_var_ratio = reof_analyzer.rotated_explained_variance_ratio * 100return precip_da, reof_analyzer, reof_var_ratioif __name__ == "__main__":    precip_da, reof_analyzer, reof_var_ratio = main()

结果

结果显示,夏季中国东部地区REOF第一模态解释方差为9.6%(原文7.5%),其以长江流域显著的降水为主,说明长江流域是东亚夏季风的主要雨带!

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